Transcript: DANT1:6

Basic information

LNCipedia transcript ID: DANT1:6 
LNCipedia gene ID: DANT1
Location (hg38): chrX:115841010-115843050
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 280 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000229335.1|ENST00000415394.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -86.6698 non-coding 
CPAT coding probability 1.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
DANT1:6 no no no no

Available literature

  1. Figueroa (2015), Two novel DXZ4-associated long noncoding RNAs show developmental changes in expression coincident with heterochromatin formation at the human (Homo sapiens) macrosatellite repeat., Chromosome Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 DANT1:6
5.0 DANT1:6
5.1 DANT1:6
5.2 DANT1:6