Transcript: CYP17A1-AS1:2

Basic information

LNCipedia transcript ID: CYP17A1-AS1:2 
HGNC Gene Symbol: CYP17A1-AS1    
HGNC Full Gene Name: CYP17A1 antisense RNA 1
Ensembl Gene ID: ENSG00000203886
Ensembl Transcript ID: ENST00000369884
Location (hg38): chr10:102832721-102834516
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 491 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000369884.4; CYP17A1-AS1-001; OTTHUMT00000050105.2
Alternative gene names: ENSG00000203886.4; CYP17A1-AS1; OTTHUMG00000018970.2; bA753C18.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -339.997 non-coding 
CPAT coding probability 9.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CYP17A1-AS1:2 no no no no

Available literature

  1. Shen (2014), Long non-coding RNA profiling in laryngeal squamous cell carcinoma and its clinical significance: potential biomarkers for LSCC., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf26-1:1
4.0 CYP17A1-AS1:2
4.1 CYP17A1-AS1:2
5.0 CYP17A1-AS1:2
5.1 CYP17A1-AS1:2
5.2 CYP17A1-AS1:2