Transcript: CXXC5-AS1:5

Basic information

LNCipedia transcript ID: CXXC5-AS1:5 
LNCipedia gene ID: CXXC5-AS1
Location (hg38): chr5:139648999-139649728
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 577 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000250635.1|ENST00000514287.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -105.2004 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CXXC5-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-TMEM173-1:2
5.0 lnc-TMEM173-1:2
5.1 CXXC5-AS1:3
5.2 CXXC5-AS1:5