Transcript: CSTF3-DT:13

Basic information

LNCipedia transcript ID: CSTF3-DT:13 
LNCipedia gene ID: CSTF3-DT
Location (hg38): chr11:33161626-33162030
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 405 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000247151.2|MICT00000056835.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -953.1856 non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CSTF3-DT:13 yes no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CSTF3-AS1:4
5.0 CSTF3-AS1:4
5.1 CSTF3-DT:2
5.2 CSTF3-DT:13