Transcript: COX10-AS1:27

Basic information

LNCipedia transcript ID: COX10-AS1:27 
LNCipedia gene ID: COX10-AS1
Location (hg38): chr17:13930239-13931155
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 917 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000236088.5|ENCT00000181106.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -48.6999 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
COX10-AS1:27 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 COX10-AS1:27
5.0 COX10-AS1:27
5.1 COX10-AS1:27
5.2 COX10-AS1:27