Transcript: CNTFR-AS1:3

Basic information

LNCipedia transcript ID: CNTFR-AS1:3 
LNCipedia gene ID: CNTFR-AS1
RefSeq ID: NR_024369
Location (hg38): chr9:34568012-34583072
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 884 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT130862; NR_024369; NR_024369.1
Alternative gene names: ; CNTFR-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -107.3423 non-coding 
CPAT coding probability 0.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CNTFR-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DNAI1-2:7
4.0 CNTFR-AS1:3
4.1 CNTFR-AS1:3
5.0 CNTFR-AS1:3
5.1 CNTFR-AS1:3
5.2 CNTFR-AS1:3