Transcript: CLMAT3:6
Basic information
LNCipedia transcript ID: CLMAT3:6
HGNC Gene Symbol: CLMAT3
HGNC Full Gene Name:
colorectal liver metastasis associated transcript 3
Ensembl Gene ID:
ENSG00000249035
Ensembl Transcript ID:
ENST00000510576
RefSeq ID:
NR_109873
Location (hg38): chr5:151676945-151687910
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1973 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000510576; ENST00000510576.2; CTB-113P19.1-001; OTTHUMT00000373847.1; NONHSAT104623; ENST00000510576.6; NR_109873.1
Alternative gene names: ENSG00000249035; CTB-113P19.1; ENSG00000249035.2; OTTHUMG00000163500.2; ENSG00000249035.6; CLMAT3
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
Available literature
- Peffers (2015), Transcriptome analysis of ageing in uninjured human Achilles tendon., Arthritis Res. Ther.
- Ye (2015), Aberrant expression of long noncoding RNAs in colorectal cancer with liver metastasis., Tumour Biol.
LNCipedia transcript ID history
| LNCipedia version | LNCipedia transcript ID |
|---|---|
| 1.3 | lnc-G3BP1-1:1 |
| 3.1 | lnc-G3BP1-2:1 |
| 4.0 | lnc-G3BP1-2:1 |
| 4.1 | lnc-G3BP1-2:1 |
| 5.0 | lnc-G3BP1-2:1 |
| 5.1 | CLMAT3:2 |
| 5.2 | CLMAT3:6 |