Transcript: CLEC12A-AS1:4

Basic information

LNCipedia transcript ID: CLEC12A-AS1:4 
HGNC Gene Symbol: CLEC12A-AS1    
HGNC Full Gene Name: CLEC12A antisense RNA 1
Ensembl Gene ID: ENSG00000231560
Ensembl Transcript ID: ENST00000420905
Location (hg38): chr12:9948137-9953336
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3956 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000420905; ENST00000420905.1; AC091814.3-001; OTTHUMT00000316755.1; NONHSAT026856
Alternative gene names: ENSG00000231560; AC091814.3; ENSG00000231560.1; OTTHUMG00000150192.1; CLEC12A-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 147.7059 coding 
CPAT coding probability 10.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
CLEC12A-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CLEC2A-2:1
3.1 lnc-CLEC2A-2:1
4.0 lnc-CLEC2A-2:1
4.1 lnc-CLEC2A-2:1
5.0 lnc-CLEC2A-2:1
5.1 CLEC12A-AS1:3
5.2 CLEC12A-AS1:4