Transcript: CELF2-AS2:5

Basic information

LNCipedia transcript ID: CELF2-AS2:5 
LNCipedia gene ID: CELF2-AS2
Location (hg38): chr10:11075131-11098473
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 851 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000432370.1; RP1-33E13.1-001; OTTHUMT00000046752.1; NONHSAT011403
Alternative gene names: ENSG00000237986.1; RP1-33E13.1; OTTHUMG00000017665.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -150.4993 non-coding 
CPAT coding probability 0.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CELF2-AS2:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf31-3:1
4.0 CELF2-AS2:5
4.1 CELF2-AS2:5
5.0 CELF2-AS2:5
5.1 CELF2-AS2:5
5.2 CELF2-AS2:5