Transcript: CDH23-AS1:1

Basic information

LNCipedia transcript ID: CDH23-AS1:1 
LNCipedia gene ID: CDH23-AS1
RefSeq ID: NR_120672
Location (hg38): chr10:71508153-71511920
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 425 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120672; NR_120672.1
Alternative gene names: bA327E2.3; LOC102723377


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -509.9297 non-coding 
CPAT coding probability 0.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CDH23-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C10orf105-1:2
4.0 CDH23-AS1:1
4.1 CDH23-AS1:1
5.0 CDH23-AS1:1
5.1 CDH23-AS1:1
5.2 CDH23-AS1:1