Transcript: CCNT2-AS1:18

Basic information

LNCipedia transcript ID: CCNT2-AS1:18 
LNCipedia gene ID: CCNT2-AS1
Location (hg38): chr2:134864719-134918658
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1778 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224043.3|FTMT20500101721.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -108.8795 non-coding 
CPAT coding probability 3.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CCNT2-AS1:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 CCNT2-AS1:18
5.0 CCNT2-AS1:18
5.1 CCNT2-AS1:18
5.2 CCNT2-AS1:18