Transcript: CATIP-AS2:1

Basic information

LNCipedia transcript ID: CATIP-AS2:1 
HGNC Gene Symbol: CATIP-AS2    
HGNC Full Gene Name: CATIP antisense RNA 2
Ensembl Gene ID: ENSG00000237281
Ensembl Transcript ID: ENST00000411433
Location (hg38): chr2:218326889-218357966
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 535 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000411433.1; AC021016.8-001; OTTHUMT00000338557.1; NONHSAT076904
Alternative gene names: ENSG00000237281.1; AC021016.8; OTTHUMG00000155145.1; CATIP-AS2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -989.5228 non-coding 
CPAT coding probability 16.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CATIP-AS2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMBIM1-1:1
4.0 CATIP-AS2:1
4.1 CATIP-AS2:1
5.0 CATIP-AS2:1
5.1 CATIP-AS2:1
5.2 CATIP-AS2:1