Transcript: CACNA1C-IT2:2

Basic information

LNCipedia transcript ID: CACNA1C-IT2:2 
LNCipedia gene ID: CACNA1C-IT2
Location (hg38): chr12:2048352-2049462
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 588 bp
Exons: 2
Sources: Refseq - Dec 2014
Alternative transcript names: NR_046768
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -186.5432 non-coding 
CPAT coding probability 0.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
CACNA1C-IT2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LRTM2-3:2
4.0 CACNA1C-IT2:2
4.1 CACNA1C-IT2:2
5.0 CACNA1C-IT2:2
5.1 CACNA1C-IT2:2
5.2 CACNA1C-IT2:2