Transcript: C5orf64-AS1:12

Basic information

LNCipedia transcript ID: C5orf64-AS1:12 
LNCipedia gene ID: C5orf64-AS1
Location (hg38): chr5:61735138-61735669
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 432 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00009676; NONHSAT101691
Alternative gene names: XLOC_004844; linc-C5orf43-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -249.2966 non-coding 
CPAT coding probability 10.01% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
C5orf64-AS1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C5orf43-3:2
3.1 lnc-C5orf43-5:2
4.0 lnc-C5orf43-5:2
4.1 lnc-C5orf43-5:2
5.0 lnc-C5orf43-5:2
5.1 C5orf64-AS1:5
5.2 C5orf64-AS1:12