Transcript: C3orf67-AS1:4

Basic information

LNCipedia transcript ID: C3orf67-AS1:4 
HGNC Gene Symbol: C3orf67-AS1    
HGNC Full Gene Name: C3orf67 antisense RNA 1
Ensembl Gene ID: ENSG00000242428
Ensembl Transcript ID: ENST00000482372
RefSeq ID: NR_110820
Location (hg38): chr3:58824471-59019093
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2203 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000482372.1; RP11-147N17.1-003; OTTHUMT00000353817.1; NONHSAT090146; NR_110820; NR_110820.1
Alternative gene names: ENSG00000242428.1; RP11-147N17.1; OTTHUMG00000159203.1; ENSG00000242428.5; C3orf67-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -59.0834 non-coding 
CPAT coding probability 2.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
C3orf67-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KCTD6-4:4
4.0 C3orf67-AS1:4
4.1 C3orf67-AS1:4
5.0 C3orf67-AS1:4
5.1 C3orf67-AS1:4
5.2 C3orf67-AS1:4