Transcript: C1RL-AS1:8

Basic information

LNCipedia transcript ID: C1RL-AS1:8 
HGNC Gene Symbol: C1RL-AS1    
HGNC Full Gene Name: C1RL antisense RNA 1
Ensembl Gene ID: ENSG00000205885
Ensembl Transcript ID: ENST00000535078
Location (hg38): chr12:7120558-7122501
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 325 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000535078.1; ABC12-49244600F4.3-005; OTTHUMT00000398552.1; NONHSAT026236
Alternative gene names: ENSG00000205885.3; ABC12-49244600F4.3; OTTHUMG00000168164.1; C1RL-AS1; ENSG00000205885.7; MATL2963


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -149.4708 non-coding 
CPAT coding probability 0.58% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
C1RL-AS1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CLSTN3-1:6
4.0 C1RL-AS1:8
4.1 C1RL-AS1:8
5.0 C1RL-AS1:8
5.1 C1RL-AS1:8
5.2 C1RL-AS1:8