Transcript: C1RL-AS1:11

Basic information

LNCipedia transcript ID: C1RL-AS1:11 
LNCipedia gene ID: C1RL-AS1
Location (hg38): chr12:7108593-7110470
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 528 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000205885.3|ENST00000536679.1
Alternative gene names: MATL2963


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -60.1367 non-coding 
CPAT coding probability 4.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
C1RL-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 C1RL-AS1:11
5.0 C1RL-AS1:11
5.1 C1RL-AS1:11
5.2 C1RL-AS1:11