Transcript: BSN-AS1:1

Basic information

LNCipedia transcript ID: BSN-AS1:1 
HGNC Gene Symbol: BSN-AS1    
HGNC Full Gene Name: BSN antisense RNA 1
Ensembl Gene ID: ENSG00000235120
Ensembl Transcript ID: ENST00000442384
Location (hg38): chr3:49640483-49641769
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 461 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000442384.1; BSN-AS1-001; OTTHUMT00000346411.1; NONHSAT089710
Alternative gene names: ENSG00000235120.1; BSN-AS1; OTTHUMG00000156880.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -57.0125 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BSN-AS1:1 no no no no

Available literature

  1. Hrdlickova (2014), Expression profiles of long non-coding RNAs located in autoimmune disease-associated regions reveal immune cell-type specificity., Genome Med


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-MST1-1:1
4.0 BSN-AS1:1
4.1 BSN-AS1:1
5.0 BSN-AS1:1
5.1 BSN-AS1:1
5.2 BSN-AS1:1