Transcript: BHLHE40-AS1:6

Basic information

LNCipedia transcript ID: BHLHE40-AS1:6 
HGNC Gene Symbol: BHLHE40-AS1    
HGNC Full Gene Name: BHLHE40 antisense RNA 1
Ensembl Gene ID: ENSG00000235831
Ensembl Transcript ID: ENST00000441386
Location (hg38): chr3:4898679-4979937
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 557 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000441386; ENST00000441386.2; AC018816.4-003; OTTHUMT00000338960.1; NONHSAT087646
Alternative gene names: ENSG00000235831; AC018816.4; ENSG00000235831.2; OTTHUMG00000155242.1; BHLHE40-AS1; ENSG00000235831.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -252.768 non-coding 
CPAT coding probability 26.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BHLHE40-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AC018816.3.1-3:3
3.1 lnc-AC018816.3.1-3:3
4.0 BHLHE40-AS1:6
4.1 BHLHE40-AS1:6
5.0 BHLHE40-AS1:6
5.1 BHLHE40-AS1:6
5.2 BHLHE40-AS1:6