Transcript: BEAN1-AS1:3

Basic information

LNCipedia transcript ID: BEAN1-AS1:3 
HGNC Gene Symbol: BEAN1-AS1    
HGNC Full Gene Name: BEAN1 antisense RNA 1
Ensembl Gene ID: ENSG00000261656
Ensembl Transcript ID: ENST00000569125
Location (hg38): chr16:66469975-66481230
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 530 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000569125.1; CTD-2258A20.5-003; OTTHUMT00000431066.2; NONHSAT143010
Alternative gene names: ENSG00000261656.1; CTD-2258A20.5; OTTHUMG00000175781.2; ENSG00000261656.5; BEAN1-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.4644 non-coding 
CPAT coding probability 1.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BEAN1-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TK2-1:1
4.0 BEAN1-AS1:3
4.1 BEAN1-AS1:3
5.0 BEAN1-AS1:3
5.1 BEAN1-AS1:3
5.2 BEAN1-AS1:3