Transcript: BAALC-AS1:3

Basic information

LNCipedia transcript ID: BAALC-AS1:3 
LNCipedia gene ID: BAALC-AS1
Location (hg38): chr8:103266545-103298782
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1709 bp
Exons: 5
Sources: NONCODE v4
Alternative transcript names: NONHSAT128175
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.1506 non-coding 
CPAT coding probability 10.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
BAALC-AS1:3 no no no no

Available literature

  1. Chen (2018), LncFZD6 initiates Wnt/β-catenin and liver TIC self-renewal through BRG1-mediated FZD6 transcriptional activation., Oncogene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C8orf56-1:11
4.0 BAALC-AS1:3
4.1 BAALC-AS1:3
5.0 BAALC-AS1:3
5.1 BAALC-AS1:3
5.2 BAALC-AS1:3