Transcript: AZIN1-AS1:3

Basic information

LNCipedia transcript ID: AZIN1-AS1:3 
LNCipedia gene ID: AZIN1-AS1
RefSeq ID: NR_126339
Location (hg38): chr8:102864271-102977876
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 807 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_126339; NR_126339.1
Alternative gene names: ; AZIN1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -112.88 non-coding 
CPAT coding probability 43.66% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
AZIN1-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KB-1507C5.2.1-4:23
4.0 AZIN1-AS1:3
4.1 AZIN1-AS1:3
5.0 AZIN1-AS1:3
5.1 AZIN1-AS1:3
5.2 AZIN1-AS1:3