Transcript: ATP11A-AS1:4

Basic information

LNCipedia transcript ID: ATP11A-AS1:4 
LNCipedia gene ID: ATP11A-AS1
Location (hg38): chr13:112753742-112754698
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 615 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT035292
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.5752 non-coding 
CPAT coding probability 11.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ATP11A-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TUBGCP3-3:5
4.0 ATP11A-AS1:4
4.1 ATP11A-AS1:4
5.0 ATP11A-AS1:4
5.1 ATP11A-AS1:4
5.2 ATP11A-AS1:4