Transcript: ASTN2-AS1:1

Basic information

LNCipedia transcript ID: ASTN2-AS1:1 
HGNC Gene Symbol: ASTN2-AS1    
HGNC Full Gene Name: ASTN2 antisense RNA 1
Ensembl Gene ID: ENSG00000229105
Ensembl Transcript ID: ENST00000418250
RefSeq ID: NR_033973
Location (hg38): chr9:116504283-116562293
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1756 bp
Exons: 12
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000418250.1; RP11-264C15.2-001; OTTHUMT00000053801.1; NONHSAT134441; NR_033973; NR_033973.1
Alternative gene names: ENSG00000229105.1; RP11-264C15.2; OTTHUMG00000020556.1; ASTN2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.512 non-coding 
CPAT coding probability 9.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ASTN2-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PAPPA-2:1
4.0 ASTN2-AS1:1
4.1 ASTN2-AS1:1
5.0 ASTN2-AS1:1
5.1 ASTN2-AS1:1
5.2 ASTN2-AS1:1