Transcript: ARHGEF7-AS2:3

Basic information

LNCipedia transcript ID: ARHGEF7-AS2:3 
HGNC Gene Symbol: ARHGEF7-AS2    
HGNC Full Gene Name: ARHGEF7 antisense RNA 2
Ensembl Gene ID: ENSG00000235875
Ensembl Transcript ID: ENST00000425094
RefSeq ID: NR_046667
Location (hg38): chr13:111113812-111115678
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1239 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT035200; ENST00000425094.2; NR_046667.1
Alternative gene names: ENSG00000235875.3; ARHGEF7-AS2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -22.1581 non-coding 
CPAT coding probability 6.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ARHGEF7-AS2:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD10-2:3
4.0 ARHGEF7-AS2:3
4.1 ARHGEF7-AS2:3
5.0 ARHGEF7-AS2:3
5.1 ARHGEF7-AS2:3
5.2 ARHGEF7-AS2:3