Transcript: ARHGAP5-AS1:1

Basic information

LNCipedia transcript ID: ARHGAP5-AS1:1 
LNCipedia gene ID: ARHGAP5-AS1
Location (hg38): chr14:32073785-32076877
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3093 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA404:1
Alternative gene names: MGC15504


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -122.8755 non-coding 
CPAT coding probability 9.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ARHGAP5-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 ARHGAP5-AS1:1
4.1 ARHGAP5-AS1:1
5.0 ARHGAP5-AS1:1
5.1 ARHGAP5-AS1:1
5.2 ARHGAP5-AS1:1