Transcript: APCDD1L-DT:28

Basic information

LNCipedia transcript ID: APCDD1L-DT:28 
LNCipedia gene ID: APCDD1L-DT
RefSeq ID: NR_034147
Location (hg38): chr20:58515379-58619892
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2096 bp
Exons: 7
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT080548; NR_034147; NR_034147.1
Alternative gene names: ; APCDD1L-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -116.3642 non-coding 
CPAT coding probability 14.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
APCDD1L-DT:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VAPB-1:11
4.0 APCDD1L-AS1:4
4.1 APCDD1L-AS1:4
5.0 APCDD1L-AS1:4
5.1 APCDD1L-DT:5
5.2 APCDD1L-DT:28