Transcript: ANO1-AS1:1

Basic information

LNCipedia transcript ID: ANO1-AS1:1 
HGNC Gene Symbol: ANO1-AS1    
HGNC Full Gene Name: ANO1 antisense RNA 1
Ensembl Gene ID: ENSG00000254902
Ensembl Transcript ID: ENST00000524987
Location (hg38): chr11:70187788-70188509
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 646 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000524987.1; ANO1-AS1-001; OTTHUMT00000393724.1; NONHSAT022635
Alternative gene names: ENSG00000254902.1; ANO1-AS1; OTTHUMG00000167205.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -72.167 non-coding 
CPAT coding probability 62.94% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ANO1-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SHANK2-6:1
4.0 ANO1-AS1:1
4.1 ANO1-AS1:1
5.0 ANO1-AS1:1
5.1 ANO1-AS1:1
5.2 ANO1-AS1:1