Transcript: ALDH1L1-AS2:4

Basic information

LNCipedia transcript ID: ALDH1L1-AS2:4 
HGNC Gene Symbol: ALDH1L1-AS2    
HGNC Full Gene Name: ALDH1L1 antisense RNA 2
Ensembl Gene ID: ENSG00000246022
Ensembl Transcript ID: ENST00000500525
Location (hg38): chr3:126207255-126210166
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2236 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000500525; ENST00000500525.1; ALDH1L1-AS2-003; OTTHUMT00000369892.1; NONHSAT091651
Alternative gene names: ENSG00000246022; ALDH1L1-AS2; ENSG00000246022.2; OTTHUMG00000162642.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -77.8372 non-coding 
CPAT coding probability 14.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ALDH1L1-AS2:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CCDC37-5:3
3.1 lnc-CCDC37-5:3
4.0 ALDH1L1-AS2:4
4.1 ALDH1L1-AS2:4
5.0 ALDH1L1-AS2:4
5.1 ALDH1L1-AS2:4
5.2 ALDH1L1-AS2:4