Transcript: ALDH1L1-AS2:2

Basic information

LNCipedia transcript ID: ALDH1L1-AS2:2 
LNCipedia gene ID: ALDH1L1-AS2
Location (hg38): chr3:126180065-126210168
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2323 bp
Exons: 2
Sources: Refseq - Dec 2014
Alternative transcript names: NR_046383
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -77.8372 non-coding 
CPAT coding probability 14.80% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ALDH1L1-AS2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCDC37-5:4
4.0 ALDH1L1-AS2:2
4.1 ALDH1L1-AS2:2
5.0 ALDH1L1-AS2:2
5.1 ALDH1L1-AS2:2
5.2 ALDH1L1-AS2:2