Transcript: ADARB2-AS1:1

Basic information

LNCipedia transcript ID: ADARB2-AS1:1 
LNCipedia gene ID: ADARB2-AS1
RefSeq ID: NR_033387
Location (hg38): chr10:1526630-1556984
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 644 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT010932; NR_033387; NR_033387.1
Alternative gene names: bA466B20.1; ADARB2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 20.6143 non-coding 
CPAT coding probability 62.29% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
ADARB2-AS1:1 yes no no no

Available literature

  1. Permuth (2017), Linc-ing Circulating Long Non-coding RNAs to the Diagnosis and Malignant Prediction of Intraductal Papillary Mucinous Neoplasms of the Pancreas., Sci Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WDR37-2:3
4.0 ADARB2-AS1:1
4.1 ADARB2-AS1:1
5.0 ADARB2-AS1:1
5.1 ADARB2-AS1:1
5.2 ADARB2-AS1:1