Transcript: ACOXL-AS1:5

Basic information

LNCipedia transcript ID: ACOXL-AS1:5 
HGNC Gene Symbol: ACOXL-AS1    
HGNC Full Gene Name: ACOXL antisense RNA 1
Ensembl Gene ID: ENSG00000204581
Ensembl Transcript ID: ENST00000418615
Location (hg38): chr2:111112934-111115588
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 453 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000418615.1; AC096670.3-001; OTTHUMT00000331944.1; NONHSAT073612
Alternative gene names: ENSG00000204581.2; AC096670.3; OTTHUMG00000153643.1; ACOXL-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -170.3035 non-coding 
CPAT coding probability 14.23% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ACOXL-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC108463.1-1:1
4.0 lnc-AC108463.1-1:1
4.1 lnc-AC108463.1-1:1
5.0 lnc-AC108463.1-1:1
5.1 ACOXL-AS1:2
5.2 ACOXL-AS1:5