Gene: lnc-SNRPN-1
Basic information
LNCipedia gene ID: lnc-SNRPN-1
Location (hg38): chr15:24984854-24998544
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA_gene
Transcripts: 7
Transcripts
| Transcript ID | Location (hg38) | Length |
|---|---|---|
| lnc-SNRPN-1:10 | chr15:24984854-24985173 | 320 bp |
| lnc-SNRPN-1:11 | chr15:24984854-24998544 | 13183 bp |
| lnc-SNRPN-1:12 | chr15:24984860-24988232 | 3373 bp |
| lnc-SNRPN-1:13 | chr15:24984864-24985173 | 310 bp |
| lnc-SNRPN-1:14 | chr15:24986779-24989509 | 2697 bp |
| lnc-SNRPN-1:15 | chr15:24991486-24991753 | 268 bp |
| lnc-SNRPN-1:16 | chr15:24993775-24994849 | 567 bp |
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| lnc-SNRPN-1 | no | no | no | no |
Available literature
- Kanduri (2016), Long noncoding RNAs: Lessons from genomic imprinting., Biochim. Biophys. Acta
- Wang (2015), Identification of lncRNA-associated competing triplets reveals global patterns and prognostic markers for cancer., Nucleic Acids Res.
- Zhao (2015), Identification of cancer-related lncRNAs through integrating genome, regulome and transcriptome features., Mol Biosyst
- Ding (2014), Expression and clinical significance of the long non-coding RNA PVT1 in human gastric cancer., Onco Targets Ther
- Murrell (2014), Cross-talk between imprinted loci in Prader-Willi syndrome., Nat. Genet.
- Stelzer (2014), The noncoding RNA IPW regulates the imprinted DLK1-DIO3 locus in an induced pluripotent stem cell model of Prader-Willi syndrome., Nat. Genet.
- Clark (2012), Genome-wide analysis of long noncoding RNA stability., Genome Res.
- Vitali (2010), Long nuclear-retained non-coding RNAs and allele-specific higher-order chromatin organization at imprinted snoRNA gene arrays., J. Cell. Sci.
- Runte (2001), The IC-SNURF-SNRPN transcript serves as a host for multiple small nucleolar RNA species and as an antisense RNA for UBE3A., Hum. Mol. Genet.
- Wevrick (1997), An imprinted mouse transcript homologous to the human imprinted in Prader-Willi syndrome (IPW) gene., Hum. Mol. Genet.
- Rachmilewitz (1996), Characterization of the imprinted IPW gene: allelic expression in normal and tumorigenic human tissues., Oncogene
- Wevrick (1994), Identification of a novel paternally expressed gene in the Prader-Willi syndrome region., Hum. Mol. Genet.