Gene: JPX

Basic information

LNCipedia gene ID: JPX 
Location (hg38): chrX:73944184-74070832
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA_gene
Transcripts: 49

Transcripts

Transcript IDLocation (hg38)Length
JPX:1 chrX:73944272-74000547 2053 bp
JPX:10 chrX:73944342-74000491 2194 bp
JPX:11 chrX:73944342-74005252 3490 bp
JPX:12 chrX:73944343-73999503 829 bp
JPX:13 chrX:73944344-73945899 1438 bp
JPX:14 chrX:73944346-73944946 483 bp
JPX:15 chrX:73944346-73999368 762 bp
JPX:16 chrX:73944351-74004551 476 bp
JPX:17 chrX:73944367-73947430 475 bp
JPX:18 chrX:73944602-73947206 269 bp
JPX:19 chrX:73946999-73949880 2882 bp
JPX:2 chrX:73944272-74000547 1466 bp
JPX:20 chrX:73948346-73952178 3833 bp
JPX:21 chrX:73948973-73949558 451 bp
JPX:22 chrX:73988141-73996496 8356 bp
JPX:23 chrX:73998413-74004983 1146 bp
JPX:24 chrX:73999166-74004983 2045 bp
JPX:25 chrX:74003682-74009983 6302 bp
JPX:26 chrX:74069276-74070832 1182 bp
JPX:27 chrX:73944326-73947206 545 bp
JPX:28 chrX:73944326-73987997 25206 bp
JPX:29 chrX:73944326-73999114 579 bp
JPX:3 chrX:73944324-74000491 2212 bp
JPX:30 chrX:73944326-74000546 1488 bp
JPX:31 chrX:73944326-74004267 5132 bp
JPX:32 chrX:73944326-74004351 500 bp
JPX:33 chrX:73944326-74004551 623 bp
JPX:34 chrX:73944326-74009956 7048 bp
JPX:35 chrX:73944326-74070408 1694 bp
JPX:36 chrX:73944342-73947430 500 bp
JPX:37 chrX:73944342-73996663 640 bp
JPX:38 chrX:73944342-73999368 766 bp
JPX:39 chrX:73944342-73999503 830 bp
JPX:4 chrX:73944324-73999114 581 bp
JPX:40 chrX:73944342-74000491 2194 bp
JPX:41 chrX:73944342-74004551 485 bp
JPX:42 chrX:73944342-73947206 529 bp
JPX:43 chrX:73944342-73944946 487 bp
JPX:44 chrX:73945941-73984755 3634 bp
JPX:45 chrX:73944184-74012945 9658 bp
JPX:46 chrX:73944236-74032804 1620 bp
JPX:47 chrX:73944324-74070384 1672 bp
JPX:5 chrX:73944324-74004351 502 bp
JPX:50 chrX:74011036-74012096 1061 bp
JPX:51 chrX:74031462-74031820 359 bp
JPX:6 chrX:73944324-74004551 625 bp
JPX:7 chrX:73944324-74070382 1670 bp
JPX:8 chrX:73944327-73947206 544 bp
JPX:9 chrX:73944328-74070408 1692 bp


Locus conservation

Locus conservation?
JPX no no no no

Available literature

  1. Soma (2014), Ftx is dispensable for imprinted X-chromosome inactivation in preimplantation mouse embryos., Sci Rep
  2. Takahashi (2014), Extracellular vesicle-mediated transfer of long non-coding RNA ROR modulates chemosensitivity in human hepatocellular cancer., FEBS Open Bio
  3. Ørom (2013), Long noncoding RNAs usher in a new era in the biology of enhancers., Cell
  4. Chureau (2011), Ftx is a non-coding RNA which affects Xist expression and chromatin structure within the X-inactivation center region., Hum. Mol. Genet.
  5. Horvath (2011), Comparative analysis of the primate X-inactivation center region and reconstruction of the ancestral primate XIST locus., Genome Res.
  6. Payer (2011), X-inactivation and X-reactivation: epigenetic hallmarks of mammalian reproduction and pluripotent stem cells., Hum. Genet.
  7. Romito (2011), Origin and evolution of the long non-coding genes in the X-inactivation center., Biochimie
  8. Wang (2011), Molecular mechanisms of long noncoding RNAs., Mol. Cell
  9. Kolesnikov (2010), [Comparative organization and the origin of noncoding regulatory RNA genes from X-chromosome inactivation center of human and mouse]., Genetika
  10. Tian (2010), The long noncoding RNA, Jpx, is a molecular switch for X chromosome inactivation., Cell
  11. Tsai (2008), Higher order chromatin structure at the X-inactivation center via looping DNA., Dev. Biol.
  12. Chureau (2002), Comparative sequence analysis of the X-inactivation center region in mouse, human, and bovine., Genome Res.
  13. Johnston (2002), Enox, a novel gene that maps 10 kb upstream of Xist and partially escapes X inactivation., Genomics