Transcript: lnc-LTF-1:8

Basic information

LNCipedia transcript ID: lnc-LTF-1:8 
LNCipedia gene ID: lnc-LTF-1
Location (hg38): chr3:46363788-46371352
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1367 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000223552.1|HBMT00000998977.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.5559 non-coding 
CPAT coding probability 0.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-LTF-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-LTF-1:8
5.0 lnc-LTF-1:8
5.1 lnc-TMEM89-52:8
5.2 lnc-LTF-1:8