Transcript: lnc-TSPAN14-3:1

Basic information

LNCipedia transcript ID: lnc-TSPAN14-3:1 
LNCipedia gene ID: lnc-TSPAN14-3
Location (hg38): chr10:80639473-80643710
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 672 bp
Exons: 3
Sources: Nielsen et al.,2014
Alternative transcript names: l_340_chr10:82399228-82403466_testes
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.7217 non-coding 
CPAT coding probability 1.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSPAN14-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TSPAN14-1:1
4.0 lnc-TSPAN14-1:1
4.1 lnc-TSPAN14-1:1
5.0 lnc-TSPAN14-1:1
5.1 lnc-MTRNR2L5-264:1
5.2 lnc-TSPAN14-3:1