Transcript: lnc-TSPAN14-2:4

Basic information

LNCipedia transcript ID: lnc-TSPAN14-2:4 
LNCipedia gene ID: lnc-TSPAN14-2
RefSeq ID: NR_120662
Location (hg38): chr10:80531250-80533123
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 921 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_120662; NR_120662.1
Alternative gene names: LOC102723703


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -27.3215 non-coding 
CPAT coding probability 3.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSPAN14-2:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SH2D4B-2:2
4.0 lnc-SH2D4B-2:2
4.1 lnc-SH2D4B-2:2
5.0 lnc-SH2D4B-2:2
5.1 lnc-MTRNR2L5-263:2
5.2 lnc-TSPAN14-2:4