Transcript: lnc-TSPAN13-7:1

Basic information

LNCipedia transcript ID: lnc-TSPAN13-7:1 
LNCipedia gene ID: lnc-TSPAN13-7
Location (hg38): chr7:17066240-17093771
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 338 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013360; NONHSAT119315
Alternative gene names: XLOC_005997; linc-AHR-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -174.0891 non-coding 
CPAT coding probability 2.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-TSPAN13-7:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AHR-2:1
3.1 lnc-AHR-2:1
4.0 lnc-AHR-2:1
4.1 lnc-AHR-2:1
5.0 lnc-AHR-2:1
5.1 lnc-SNX10-81:1
5.2 lnc-TSPAN13-7:1